| TF name | Position | PWM scan score |
| FruR | 183-200 | 14.616 |
| GalR | 249-264 | 10.075 |
| GalS | 249-264 | 10.075 |
| PhoB | 77-96 | 9.766 |
| GcvA | 263-291 | 9.248 |
| Fis | 375-395 | 9.214 |
| NarP | 236-242 | 8.982 |
| RcsB | 161-174 | 8.907 |
| MalT | 109-118 | 8.295 |
| OmpR | 73-92 | 8.083 |
| IHF | 187-199 | 7.488 |
| NarL | 162-168 | 7.107 |
| MetJ | 46-53 | 6.954 |
| Lrp | 163-174 | 6.911 |
| FNR | 65-86 | 6.868 |
| H-NS | 190-204 | 6.698 |
| MarA | 218-238 | 6.623 |
| DnaA | 306-314 | 6.418 |
| Nac | 165-179 | 6.381 |
| MetR | 287-310 | 5.889 |
| DeoR | 203-218 | 5.579 |
| AraC | 161-178 | 5.436 |
| Rob | 226-246 | 5.117 |