| TF name | Position | PWM scan score |
| OmpR | 6-25 | 10.337 |
| Nac | 174-188 | 8.024 |
| RcsB | 108-121 | 7.858 |
| FNR | 251-272 | 7.829 |
| Lrp | 293-304 | 7.722 |
| RhaS | 383-399 | 7.703 |
| UlaR | 311-330 | 7.191 |
| TyrR | 165-186 | 7.153 |
| DeoR | 177-192 | 7.072 |
| IHF | 14-26 | 7.045 |
| Rob | 317-337 | 6.600 |
| MetJ | 351-358 | 6.471 |
| NarL | 133-139 | 6.467 |
| PhoB | 33-52 | 6.462 |
| ArgR | 12-27 | 6.441 |
| GalS | 153-168 | 6.367 |
| GalR | 153-168 | 6.367 |
| TorR | 208-217 | 6.366 |
| GlpR | 205-224 | 6.171 |
| MalT | 34-43 | 6.163 |
| FadR | 53-69 | 6.145 |
| NarP | 300-306 | 6.110 |
| CpxR | 187-201 | 6.089 |
| Fis | 84-104 | 6.078 |
| H-NS | 16-30 | 6.048 |
| PhoP | 106-122 | 5.183 |
| FruR | 140-157 | 5.021 |