| TF name | Position | PWM scan score |
| SoxS | 245-262 | 13.641 |
| IHF | 366-378 | 9.978 |
| XylR | 229-246 | 9.771 |
| PspF | 181-197 | 9.685 |
| CueR | 36-54 | 9.526 |
| Lrp | 90-101 | 9.474 |
| H-NS | 114-128 | 9.317 |
| GadE | 234-253 | 9.311 |
| RhaS | 281-297 | 8.307 |
| GlpR | 14-33 | 8.251 |
| FNR | 87-108 | 8.240 |
| PhoB | 366-385 | 7.631 |
| ArcA | 84-144 | 7.375 |
| TorR | 303-312 | 7.265 |
| CysB | 88-129 | 7.174 |
| CRP | 124-145 | 6.869 |
| Rob | 203-223 | 6.790 |
| DeoR | 255-270 | 6.754 |
| OmpR | 251-270 | 6.536 |
| NarP | 374-380 | 6.524 |
| ModE | 311-337 | 6.470 |
| Fis | 251-271 | 6.461 |
| MalT | 37-46 | 6.421 |
| NtrC | 111-127 | 6.294 |
| Fur | 87-101 | 6.019 |
| Nac | 154-168 | 6.007 |
| NorR | 205-221 | 5.845 |
| AgaR | 309-332 | 5.843 |
| IdnR | 117-132 | 5.647 |
| UxuR | 240-257 | 5.634 |
| AraC | 162-179 | 5.548 |
| CpxR | 378-392 | 5.302 |
| TyrR | 330-351 | 5.257 |
| NagC | 251-273 | 5.244 |
| NarL | 301-307 | 5.166 |
| PhoP | 111-127 | 5.165 |
| UlaR | 312-331 | 5.018 |