| TF name | Position | PWM scan score |
| RhaS | 187-203 | 9.987 |
| FadR | 307-323 | 9.665 |
| SoxS | 279-296 | 8.389 |
| TorR | 331-340 | 7.736 |
| IHF | 379-391 | 7.609 |
| CueR | 276-294 | 7.401 |
| GntR | 79-98 | 7.373 |
| MarA | 277-297 | 7.326 |
| H-NS | 222-236 | 7.168 |
| NarP | 336-342 | 6.598 |
| Nac | 15-29 | 6.429 |
| Lrp | 280-291 | 6.363 |
| CpxR | 334-348 | 6.082 |
| NarL | 233-239 | 5.999 |
| PhoP | 381-397 | 5.896 |
| MelR | 143-160 | 5.523 |
| DeoR | 315-330 | 5.060 |