| TF name | Position | PWM scan score |
| FhlA | 18-57 | 12.142 |
| LexA | 134-153 | 10.660 |
| CRP | 295-316 | 10.134 |
| Rob | 361-381 | 9.825 |
| DeoR | 345-360 | 8.952 |
| DnaA | 14-22 | 8.868 |
| FNR | 298-319 | 8.707 |
| Fis | 224-244 | 8.379 |
| AraC | 154-171 | 7.912 |
| GlpR | 326-345 | 7.720 |
| Lrp | 267-278 | 7.715 |
| H-NS | 28-42 | 7.499 |
| IHF | 160-172 | 7.417 |
| LacI | 65-85 | 7.224 |
| Nac | 103-117 | 7.138 |
| MalT | 377-386 | 7.033 |
| MarA | 296-316 | 6.839 |
| TorR | 104-113 | 6.764 |
| GntR | 298-317 | 6.497 |
| ModE | 243-269 | 6.374 |
| RhaS | 154-170 | 6.298 |
| NagC | 15-37 | 6.288 |
| UlaR | 213-232 | 5.806 |
| GalR | 213-228 | 5.775 |
| GalS | 213-228 | 5.775 |
| NarL | 230-236 | 5.661 |
| CpxR | 14-28 | 5.648 |
| NarP | 362-368 | 5.606 |
| ArgP | 230-242 | 5.572 |
| MelR | 293-310 | 5.483 |
| MetJ | 213-220 | 5.316 |
| NtrC | 157-173 | 5.181 |
| PhoB | 273-292 | 5.176 |