| TF name | Position | PWM scan score |
| CueR | 212-230 | 13.414 |
| RhaS | 130-146 | 11.898 |
| GlpR | 96-115 | 10.591 |
| H-NS | 194-208 | 10.407 |
| PhoP | 362-378 | 9.372 |
| IHF | 229-241 | 9.093 |
| GcvA | 226-254 | 9.080 |
| SoxS | 215-232 | 8.614 |
| PurR | 307-322 | 8.246 |
| FNR | 238-259 | 8.208 |
| RcsB | 376-389 | 7.993 |
| CysB | 226-267 | 7.761 |
| Lrp | 232-243 | 7.396 |
| NarP | 210-216 | 7.377 |
| MetR | 98-121 | 7.359 |
| IdnR | 333-348 | 6.854 |
| CRP | 88-109 | 6.751 |
| ArgR | 83-98 | 6.520 |
| ArgP | 202-214 | 6.511 |
| MarA | 289-309 | 6.455 |
| Fis | 155-175 | 6.417 |
| ModE | 221-247 | 6.101 |
| GadE | 78-97 | 5.995 |
| FruR | 338-355 | 5.954 |
| OmpR | 71-90 | 5.890 |
| TyrR | 226-247 | 5.723 |
| NarL | 157-163 | 5.568 |
| Nac | 98-112 | 5.476 |
| AraC | 107-124 | 5.430 |
| XylR | 96-113 | 5.285 |
| MetJ | 320-327 | 5.218 |