| TF name | Position | PWM scan score |
| OmpR | 266-285 | 12.876 |
| PurR | 302-317 | 11.515 |
| RcsB | 255-268 | 9.867 |
| Nac | 325-339 | 9.849 |
| NagC | 339-361 | 9.199 |
| Fis | 361-381 | 9.089 |
| NarP | 314-320 | 8.982 |
| NarL | 159-165 | 8.782 |
| IHF | 251-263 | 7.807 |
| MarA | 353-373 | 7.695 |
| H-NS | 240-254 | 7.633 |
| NtrC | 76-92 | 7.479 |
| CRP | 368-389 | 7.287 |
| MetJ | 154-161 | 6.802 |
| MalT | 61-70 | 6.744 |
| PhoB | 278-297 | 6.707 |
| Lrp | 333-344 | 6.444 |
| GadE | 364-383 | 6.388 |
| TorR | 332-341 | 6.366 |
| FadR | 294-310 | 6.190 |
| DnaA | 312-320 | 6.096 |
| LexA | 378-397 | 6.047 |
| DeoR | 176-191 | 5.876 |
| AraC | 251-268 | 5.240 |
| MelR | 163-180 | 5.071 |