| TF name | Position | PWM scan score |
| H-NS | 128-142 | 10.684 |
| RcsB | 258-271 | 10.160 |
| NagC | 101-123 | 9.750 |
| PspF | 181-197 | 9.552 |
| FNR | 322-343 | 9.312 |
| CysB | 135-176 | 8.836 |
| Fis | 370-390 | 8.816 |
| Nac | 167-181 | 8.775 |
| NarL | 176-182 | 8.755 |
| MetR | 199-222 | 8.538 |
| TorR | 361-370 | 8.087 |
| IHF | 190-202 | 7.808 |
| PhoP | 363-379 | 7.715 |
| IdnR | 365-380 | 7.486 |
| TyrR | 352-373 | 7.382 |
| PhoB | 136-155 | 7.355 |
| FruR | 126-143 | 7.287 |
| AgaR | 64-87 | 7.158 |
| MetJ | 93-100 | 7.073 |
| MarA | 43-63 | 6.943 |
| CRP | 348-369 | 6.848 |
| FhlA | 303-342 | 6.808 |
| Lrp | 141-152 | 6.690 |
| NorR | 200-216 | 6.641 |
| NarP | 181-187 | 6.629 |
| AraC | 93-110 | 6.559 |
| NtrC | 280-296 | 6.403 |
| SoxS | 131-148 | 6.084 |
| UlaR | 199-218 | 6.055 |
| Ada | 55-82 | 5.973 |
| RhaS | 304-320 | 5.945 |
| MelR | 41-58 | 5.754 |
| GlpR | 254-273 | 5.661 |