| TF name | Position | PWM scan score |
| H-NS | 320-334 | 11.732 |
| IHF | 345-357 | 11.332 |
| Fur | 330-344 | 11.018 |
| TorR | 312-321 | 10.740 |
| ArcA | 300-360 | 10.739 |
| NagC | 20-42 | 10.601 |
| PhoB | 34-53 | 10.338 |
| ModE | 345-371 | 10.076 |
| MetR | 6-29 | 9.805 |
| AraC | 38-55 | 9.696 |
| Nac | 6-20 | 9.695 |
| GcvA | 159-187 | 9.081 |
| OmpR | 317-336 | 8.952 |
| RcsB | 2-15 | 8.652 |
| CytR | 318-357 | 8.641 |
| Fis | 281-301 | 8.626 |
| FadR | 186-202 | 8.564 |
| FNR | 345-366 | 8.382 |
| DnaA | 61-69 | 8.160 |
| DeoR | 211-226 | 8.156 |
| NarP | 309-315 | 8.154 |
| Rob | 103-123 | 8.104 |
| OxyR | 295-339 | 7.858 |
| Ada | 332-359 | 7.728 |
| Lrp | 347-358 | 7.618 |
| NarL | 39-45 | 7.080 |
| PhoP | 314-330 | 6.854 |
| SoxS | 210-227 | 6.631 |
| MalT | 285-294 | 6.499 |
| UxuR | 7-24 | 6.254 |
| PspF | 262-278 | 5.888 |
| CpxR | 374-388 | 5.856 |
| GadE | 46-65 | 5.850 |
| AgaR | 224-247 | 5.671 |
| RhaS | 274-290 | 5.657 |
| Mlc | 43-65 | 5.623 |
| CysB | 26-67 | 5.615 |
| FhlA | 316-355 | 5.552 |
| GntR | 353-372 | 5.462 |
| GlpR | 84-103 | 5.423 |
| CRP | 146-167 | 5.112 |