| TF name | Position | PWM scan score |
| Fur | 137-151 | 13.037 |
| IHF | 85-97 | 12.261 |
| DeoR | 349-364 | 12.116 |
| GcvA | 24-52 | 12.071 |
| NagC | 108-130 | 10.673 |
| Rob | 14-34 | 10.672 |
| OmpR | 78-97 | 10.650 |
| GadE | 379-398 | 10.623 |
| ArgP | 243-255 | 10.338 |
| Fis | 122-142 | 10.335 |
| NorR | 356-372 | 9.990 |
| SoxS | 134-151 | 9.822 |
| PhoP | 378-394 | 9.477 |
| MarA | 187-207 | 9.202 |
| UlaR | 88-107 | 9.089 |
| ArcA | 52-112 | 9.060 |
| GlpR | 240-259 | 9.005 |
| FNR | 76-97 | 8.750 |
| H-NS | 81-95 | 8.672 |
| XylR | 139-156 | 8.495 |
| ArgR | 375-390 | 8.166 |
| CRP | 41-62 | 7.777 |
| AgaR | 135-158 | 7.728 |
| GalS | 341-356 | 7.090 |
| GalR | 341-356 | 7.090 |
| LacI | 7-27 | 7.083 |
| AraC | 210-227 | 7.046 |
| PhoB | 235-254 | 6.957 |
| CpxR | 85-99 | 6.942 |
| Ada | 306-333 | 6.874 |
| Lrp | 106-117 | 6.839 |
| NarL | 81-87 | 6.718 |
| FruR | 362-379 | 6.684 |
| TyrR | 312-333 | 6.557 |
| RcsB | 74-87 | 6.437 |
| LexA | 373-392 | 6.391 |
| ModE | 372-398 | 6.338 |
| MelR | 232-249 | 6.251 |
| MetR | 297-320 | 6.005 |
| PspF | 140-156 | 5.971 |
| DnaA | 208-216 | 5.553 |
| CytR | 129-168 | 5.003 |