| TF name | Position | PWM scan score |
| Fis | 356-376 | 14.647 |
| UlaR | 137-156 | 12.624 |
| GcvA | 360-388 | 11.835 |
| PhoP | 261-277 | 11.591 |
| ArgR | 274-289 | 10.360 |
| MalT | 228-237 | 10.001 |
| IHF | 95-107 | 9.143 |
| NagC | 85-107 | 9.037 |
| FNR | 79-100 | 8.757 |
| RcsB | 128-141 | 8.525 |
| NtrC | 47-63 | 8.396 |
| MelR | 262-279 | 8.231 |
| Nac | 355-369 | 8.124 |
| PhoB | 51-70 | 7.893 |
| GadE | 270-289 | 7.888 |
| Rob | 98-118 | 7.861 |
| ArgP | 276-288 | 7.510 |
| MarA | 330-350 | 7.435 |
| AraC | 359-376 | 7.204 |
| H-NS | 364-378 | 7.188 |
| NorR | 145-161 | 7.186 |
| GntR | 98-117 | 7.081 |
| DnaA | 368-376 | 6.990 |
| CRP | 329-350 | 6.889 |
| PspF | 354-370 | 6.867 |
| NarL | 5-11 | 6.696 |
| Lrp | 343-354 | 6.559 |
| ArcA | 229-289 | 6.513 |
| RhaS | 86-102 | 6.500 |
| GlpR | 151-170 | 6.292 |
| DeoR | 359-374 | 5.494 |
| SoxS | 167-184 | 5.463 |