| TF name | Position | PWM scan score |
| H-NS | 367-381 | 10.510 |
| AraC | 148-165 | 9.842 |
| CpxR | 374-388 | 8.974 |
| FhlA | 67-106 | 8.757 |
| UlaR | 298-317 | 8.632 |
| NarL | 370-376 | 8.190 |
| MarA | 113-133 | 8.112 |
| UxuR | 369-386 | 7.946 |
| Rob | 363-383 | 7.892 |
| MetJ | 9-16 | 7.644 |
| GadE | 367-386 | 7.602 |
| DeoR | 211-226 | 7.130 |
| PhoP | 214-230 | 6.998 |
| Fur | 22-36 | 6.986 |
| Lrp | 136-147 | 6.822 |
| NarP | 386-392 | 6.703 |
| IHF | 228-240 | 6.696 |
| NorR | 132-148 | 6.562 |
| XylR | 308-325 | 6.466 |
| FruR | 373-390 | 6.305 |
| RcsB | 253-266 | 6.222 |
| TorR | 133-142 | 6.115 |
| CRP | 166-187 | 5.820 |
| MetR | 113-136 | 5.764 |
| PspF | 205-221 | 5.706 |
| GlpR | 24-43 | 5.700 |
| Nac | 248-262 | 5.399 |
| IdnR | 34-49 | 5.116 |