| TF name | Position | PWM scan score |
| Fis | 298-318 | 10.694 |
| FadR | 233-249 | 8.836 |
| DnaA | 179-187 | 8.503 |
| ArgP | 64-76 | 7.883 |
| NarL | 268-274 | 7.740 |
| H-NS | 128-142 | 7.471 |
| GlpR | 335-354 | 7.435 |
| NarP | 37-43 | 7.232 |
| CueR | 356-374 | 6.635 |
| ArgR | 22-37 | 6.205 |
| SoxS | 210-227 | 6.131 |
| MalT | 151-160 | 5.936 |
| DeoR | 179-194 | 5.899 |
| PspF | 125-141 | 5.387 |