| TF name | Position | PWM scan score |
| DeoR | 317-332 | 8.608 |
| NarP | 108-114 | 7.127 |
| FruR | 4-21 | 7.107 |
| IHF | 372-384 | 7.071 |
| MarA | 360-380 | 7.065 |
| AraC | 377-394 | 7.054 |
| H-NS | 356-370 | 6.882 |
| RhaS | 164-180 | 6.472 |
| NarL | 332-338 | 6.388 |
| DnaA | 351-359 | 6.356 |
| PhoB | 366-385 | 6.283 |
| NorR | 383-399 | 6.152 |
| MalT | 50-59 | 6.140 |
| IdnR | 378-393 | 6.093 |
| Fur | 366-380 | 6.034 |
| Rob | 363-383 | 5.511 |
| CueR | 150-168 | 5.014 |