| TF name | Position | PWM scan score |
| RcsB | 11-24 | 11.447 |
| SoxS | 370-387 | 11.074 |
| GcvA | 369-397 | 9.426 |
| H-NS | 375-389 | 8.963 |
| DeoR | 298-313 | 8.897 |
| OmpR | 376-395 | 8.699 |
| PhoB | 367-386 | 8.379 |
| RhaS | 33-49 | 8.173 |
| Fis | 376-396 | 7.787 |
| GlpR | 344-363 | 7.539 |
| ArgR | 379-394 | 7.165 |
| IHF | 371-383 | 6.327 |
| NagC | 345-367 | 6.314 |
| NarL | 255-261 | 6.294 |
| GalR | 34-49 | 6.032 |
| GalS | 34-49 | 6.032 |
| Nac | 375-389 | 5.786 |
| MarA | 368-388 | 5.581 |
| Lrp | 364-375 | 5.576 |
| CytR | 359-398 | 5.470 |
| CueR | 178-196 | 5.291 |
| ModE | 248-274 | 5.212 |
| Fur | 7-21 | 5.192 |
| GntR | 10-29 | 5.087 |
| ArcA | 335-395 | 5.080 |