| TF name | Position | PWM scan score |
| GntR | 67-86 | 9.619 |
| H-NS | 70-84 | 9.536 |
| IHF | 76-88 | 9.511 |
| OmpR | 143-162 | 9.466 |
| MarA | 371-391 | 9.304 |
| MelR | 97-114 | 9.000 |
| Nac | 333-347 | 8.969 |
| SoxS | 377-394 | 8.712 |
| PhoB | 72-91 | 8.244 |
| XylR | 80-97 | 8.234 |
| GadE | 84-103 | 8.076 |
| FNR | 67-88 | 8.012 |
| GlpR | 66-85 | 7.990 |
| FadR | 348-364 | 6.905 |
| CysB | 90-131 | 6.847 |
| NarL | 362-368 | 6.612 |
| DnaA | 179-187 | 6.418 |
| TorR | 340-349 | 6.315 |
| AraC | 43-60 | 6.289 |
| NarP | 10-16 | 6.110 |
| MetJ | 43-50 | 5.910 |
| ArgR | 78-93 | 5.897 |
| CRP | 64-85 | 5.527 |
| Lrp | 81-92 | 5.500 |
| Rob | 73-93 | 5.311 |
| IdnR | 129-144 | 5.257 |
| Fur | 234-248 | 5.142 |
| PhoP | 370-386 | 5.086 |