| TF name | Position | PWM scan score |
| Fis | 137-157 | 11.200 |
| GntR | 205-224 | 11.135 |
| NorR | 28-44 | 9.978 |
| GadE | 287-306 | 8.548 |
| IdnR | 200-215 | 8.239 |
| UlaR | 130-149 | 7.984 |
| PspF | 131-147 | 7.935 |
| MarA | 206-226 | 7.892 |
| ArgR | 130-145 | 7.763 |
| NarL | 248-254 | 7.336 |
| IHF | 127-139 | 7.321 |
| DeoR | 370-385 | 6.767 |
| H-NS | 134-148 | 6.680 |
| MetJ | 364-371 | 6.380 |
| AraC | 51-68 | 6.362 |
| FNR | 44-65 | 6.149 |
| FhlA | 99-138 | 6.140 |
| XylR | 333-350 | 5.987 |
| RcsB | 57-70 | 5.927 |
| RhaS | 110-126 | 5.747 |
| ArcA | 235-295 | 5.719 |
| NarP | 62-68 | 5.557 |
| Lrp | 140-151 | 5.474 |
| PhoB | 174-193 | 5.385 |
| ModE | 127-153 | 5.320 |
| Mlc | 254-276 | 5.274 |
| GlpR | 366-385 | 5.272 |
| ArgP | 54-66 | 5.148 |
| Nac | 175-189 | 5.129 |