| TF name | Position | PWM scan score |
| UxuR | 220-237 | 14.422 |
| GalS | 180-195 | 11.398 |
| GalR | 180-195 | 11.398 |
| Ada | 326-353 | 10.621 |
| CRP | 220-241 | 9.842 |
| TorR | 187-196 | 9.372 |
| PurR | 237-252 | 7.885 |
| ArcA | 203-263 | 7.883 |
| IHF | 340-352 | 7.663 |
| DnaA | 29-37 | 7.282 |
| AraC | 333-350 | 7.278 |
| MetJ | 176-183 | 6.954 |
| MetR | 246-269 | 6.917 |
| NarP | 56-62 | 6.558 |
| NorR | 99-115 | 6.380 |
| PspF | 207-223 | 6.330 |
| DeoR | 188-203 | 6.287 |
| Fis | 220-240 | 6.285 |
| Nac | 192-206 | 6.198 |
| H-NS | 125-139 | 6.146 |
| CpxR | 62-76 | 5.959 |
| TyrR | 178-199 | 5.868 |
| GadE | 92-111 | 5.466 |
| MarA | 125-145 | 5.462 |
| GlpR | 222-241 | 5.317 |