| TF name | Position | PWM scan score |
| FruR | 376-393 | 12.016 |
| GlpR | 379-398 | 11.049 |
| LacI | 47-67 | 8.762 |
| Rob | 357-377 | 8.020 |
| NtrC | 119-135 | 7.538 |
| RhaS | 311-327 | 7.310 |
| Fis | 5-25 | 7.140 |
| AraC | 72-89 | 7.114 |
| H-NS | 309-323 | 7.112 |
| NarL | 294-300 | 6.945 |
| IHF | 379-391 | 6.896 |
| Lrp | 219-230 | 6.142 |
| MetJ | 110-117 | 6.074 |
| GalR | 306-321 | 6.069 |
| GalS | 306-321 | 6.069 |
| Ada | 65-92 | 6.051 |
| FNR | 68-89 | 5.789 |
| PurR | 182-197 | 5.558 |
| MarA | 165-185 | 5.406 |
| MelR | 113-130 | 5.214 |
| XylR | 369-386 | 5.172 |
| PhoB | 31-50 | 5.157 |
| UxuR | 71-88 | 5.066 |