| TF name | Position | PWM scan score |
| GalS | 363-378 | 13.065 |
| GalR | 363-378 | 13.065 |
| Fur | 93-107 | 12.348 |
| MetJ | 327-334 | 11.073 |
| Nac | 91-105 | 11.006 |
| CRP | 19-40 | 10.666 |
| ArcA | 107-167 | 10.232 |
| MetR | 118-141 | 9.444 |
| MarA | 222-242 | 8.718 |
| TorR | 197-206 | 8.594 |
| FadR | 333-349 | 8.318 |
| MalT | 316-325 | 8.291 |
| GadE | 147-166 | 8.089 |
| ArgP | 147-159 | 8.058 |
| CueR | 168-186 | 7.790 |
| ModE | 326-352 | 7.187 |
| SoxS | 314-331 | 7.179 |
| MelR | 17-34 | 6.771 |
| H-NS | 147-161 | 6.754 |
| IHF | 81-93 | 6.687 |
| NarP | 338-344 | 6.488 |
| GlpR | 251-270 | 6.355 |
| PspF | 355-371 | 6.330 |
| Rob | 195-215 | 6.314 |
| DeoR | 363-378 | 6.109 |
| Mlc | 77-99 | 5.810 |
| NagC | 134-156 | 5.786 |
| Ada | 129-156 | 5.779 |
| Fis | 190-210 | 5.722 |
| RcsB | 152-165 | 5.693 |
| FNR | 50-71 | 5.678 |
| Lrp | 334-345 | 5.650 |
| NarL | 178-184 | 5.568 |
| TyrR | 126-147 | 5.564 |
| FhlA | 113-152 | 5.513 |
| ArgR | 196-211 | 5.285 |
| UlaR | 67-86 | 5.169 |
| GcvA | 139-167 | 5.164 |
| FruR | 82-99 | 5.152 |
| CpxR | 140-154 | 5.101 |
| PhoB | 67-86 | 5.093 |
| OmpR | 374-393 | 5.061 |
| LexA | 363-382 | 5.034 |