| TF name | Position | PWM scan score |
| DnaA | 237-245 | 9.055 |
| Fis | 374-394 | 8.632 |
| NarL | 323-329 | 7.577 |
| TorR | 311-320 | 7.359 |
| Nac | 330-344 | 7.244 |
| Rob | 218-238 | 7.097 |
| RhaS | 337-353 | 6.788 |
| MalT | 80-89 | 6.214 |
| AgaR | 305-328 | 5.991 |
| RcsB | 149-162 | 5.955 |
| AraC | 23-40 | 5.757 |
| NorR | 265-281 | 5.710 |
| Lrp | 28-39 | 5.539 |
| UxuR | 39-56 | 5.373 |
| MetR | 48-71 | 5.358 |
| DeoR | 349-364 | 5.308 |