| TF name | Position | PWM scan score |
| FadR | 53-69 | 10.577 |
| PhoB | 223-242 | 9.561 |
| IHF | 227-239 | 8.840 |
| Nac | 147-161 | 8.811 |
| AraC | 227-244 | 7.056 |
| TorR | 226-235 | 7.009 |
| H-NS | 147-161 | 6.767 |
| XylR | 299-316 | 6.631 |
| GntR | 378-397 | 6.564 |
| FNR | 227-248 | 6.346 |
| PurR | 125-140 | 6.165 |
| MalT | 10-19 | 6.123 |
| RhaS | 360-376 | 5.952 |
| Lrp | 305-316 | 5.844 |
| NtrC | 143-159 | 5.767 |
| LacI | 361-381 | 5.722 |
| Ada | 320-347 | 5.463 |