| TF name | Position | PWM scan score |
| MetR | 214-237 | 16.495 |
| ArgP | 23-35 | 15.765 |
| DeoR | 65-80 | 13.135 |
| CytR | 189-228 | 12.142 |
| GadE | 215-234 | 12.068 |
| H-NS | 195-209 | 10.563 |
| PspF | 153-169 | 10.305 |
| CRP | 61-82 | 9.638 |
| TyrR | 55-76 | 9.043 |
| Fis | 228-248 | 9.019 |
| IHF | 56-68 | 8.902 |
| PhoB | 2-21 | 8.795 |
| OxyR | 165-209 | 8.495 |
| UlaR | 145-164 | 8.214 |
| NarL | 58-64 | 8.190 |
| Lrp | 24-35 | 8.105 |
| GcvA | 41-69 | 7.929 |
| CpxR | 57-71 | 7.801 |
| ModE | 228-254 | 7.466 |
| NarP | 228-234 | 7.352 |
| MalT | 376-385 | 7.261 |
| Nac | 20-34 | 7.132 |
| TorR | 103-112 | 6.994 |
| Mlc | 156-178 | 6.782 |
| OmpR | 210-229 | 6.371 |
| NtrC | 152-168 | 6.320 |
| UxuR | 213-230 | 6.254 |
| DnaA | 299-307 | 6.246 |
| Fur | 14-28 | 6.232 |
| SoxS | 7-24 | 6.212 |
| Rob | 198-218 | 6.182 |
| MetJ | 75-82 | 6.040 |
| FruR | 258-275 | 5.889 |
| GntR | 59-78 | 5.845 |
| IdnR | 50-65 | 5.647 |
| Ada | 192-219 | 5.478 |
| RcsB | 219-232 | 5.473 |
| PhoP | 54-70 | 5.383 |
| CysB | 221-262 | 5.332 |