| TF name | Position | PWM scan score |
| Fis | 189-209 | 14.589 |
| CRP | 295-316 | 12.229 |
| RcsB | 225-238 | 11.340 |
| IHF | 386-398 | 11.057 |
| MelR | 319-336 | 10.679 |
| NtrC | 193-209 | 10.529 |
| DeoR | 358-373 | 9.831 |
| TorR | 380-389 | 8.766 |
| Nac | 256-270 | 8.347 |
| XylR | 220-237 | 7.305 |
| NarP | 63-69 | 7.232 |
| Lrp | 227-238 | 7.205 |
| FNR | 377-398 | 7.125 |
| CpxR | 384-398 | 7.053 |
| MetJ | 27-34 | 6.995 |
| Rob | 335-355 | 6.983 |
| GntR | 228-247 | 6.782 |
| PhoP | 382-398 | 6.602 |
| Mlc | 327-349 | 6.591 |
| MarA | 371-391 | 6.521 |
| NarL | 184-190 | 6.516 |
| ArcA | 325-385 | 6.511 |
| H-NS | 263-277 | 6.472 |
| MalT | 144-153 | 6.440 |
| DnaA | 314-322 | 6.219 |
| TyrR | 318-339 | 6.206 |
| UxuR | 330-347 | 6.072 |
| ArgR | 318-333 | 6.045 |
| GlpR | 70-89 | 5.579 |
| MetR | 259-282 | 5.454 |
| RhaS | 200-216 | 5.266 |
| LacI | 371-391 | 5.181 |
| LexA | 312-331 | 5.070 |
| FhlA | 182-221 | 5.053 |