| TF name | Position | PWM scan score |
| UlaR | 288-307 | 11.413 |
| IHF | 120-132 | 11.149 |
| NorR | 284-300 | 10.309 |
| MetJ | 205-212 | 8.962 |
| GlpR | 176-195 | 8.827 |
| PspF | 107-123 | 8.688 |
| PhoB | 120-139 | 8.171 |
| TyrR | 364-385 | 7.524 |
| PhoP | 173-189 | 7.429 |
| Rob | 140-160 | 7.311 |
| TorR | 136-145 | 7.214 |
| MalT | 289-298 | 6.796 |
| AraC | 268-285 | 6.787 |
| FNR | 111-132 | 6.765 |
| H-NS | 240-254 | 6.632 |
| Lrp | 134-145 | 6.512 |
| MelR | 307-324 | 6.466 |
| SoxS | 237-254 | 6.448 |
| DnaA | 234-242 | 6.433 |
| MetR | 48-71 | 6.375 |
| Fis | 110-130 | 6.285 |
| Nac | 200-214 | 6.204 |
| RcsB | 4-17 | 5.834 |
| NarL | 391-397 | 5.823 |
| DeoR | 332-347 | 5.800 |
| CpxR | 139-153 | 5.607 |
| RhaS | 26-42 | 5.310 |
| GalR | 54-69 | 5.276 |
| GalS | 54-69 | 5.276 |
| Fur | 53-67 | 5.048 |