| TF name | Position | PWM scan score |
| Ada | 58-85 | 13.935 |
| FNR | 39-60 | 13.930 |
| GlpR | 279-298 | 13.384 |
| Mlc | 19-41 | 12.839 |
| GcvA | 262-290 | 12.396 |
| UlaR | 67-86 | 12.358 |
| CRP | 36-57 | 12.313 |
| AgaR | 122-145 | 12.090 |
| AraC | 12-29 | 11.131 |
| GadE | 7-26 | 10.729 |
| SoxS | 371-388 | 9.910 |
| Nac | 131-145 | 9.580 |
| RcsB | 18-31 | 9.572 |
| PhoB | 92-111 | 9.324 |
| MetJ | 277-284 | 9.118 |
| OmpR | 45-64 | 8.891 |
| PhoP | 198-214 | 8.742 |
| ArcA | 32-92 | 8.681 |
| PspF | 364-380 | 8.522 |
| Lrp | 17-28 | 8.517 |
| ArgP | 138-150 | 8.353 |
| IHF | 48-60 | 8.224 |
| DcuR | 263-317 | 8.087 |
| CpxR | 345-359 | 7.983 |
| RhaS | 29-45 | 7.956 |
| H-NS | 6-20 | 7.866 |
| UxuR | 143-160 | 7.780 |
| MetR | 144-167 | 7.709 |
| DnaA | 141-149 | 7.517 |
| Fur | 11-25 | 7.246 |
| OxyR | 272-316 | 7.121 |
| CytR | 98-137 | 6.973 |
| Fis | 136-156 | 6.881 |
| NagC | 78-100 | 6.619 |
| ArgR | 4-19 | 6.569 |
| TorR | 305-314 | 6.531 |
| CysB | 234-275 | 6.396 |
| MarA | 103-123 | 6.101 |
| IdnR | 90-105 | 6.093 |
| LexA | 313-332 | 5.873 |
| XylR | 99-116 | 5.732 |
| TyrR | 115-136 | 5.626 |
| NarL | 255-261 | 5.541 |
| DeoR | 29-44 | 5.401 |
| MalT | 220-229 | 5.286 |