| TF name | Position | PWM scan score |
| Fur | 379-393 | 15.811 |
| GntR | 97-116 | 13.824 |
| OmpR | 368-387 | 12.334 |
| AraC | 337-354 | 11.128 |
| FNR | 372-393 | 11.077 |
| PspF | 367-383 | 10.073 |
| LexA | 220-239 | 9.925 |
| Rob | 267-287 | 9.691 |
| SoxS | 369-386 | 9.531 |
| CRP | 97-118 | 9.471 |
| Fis | 300-320 | 9.300 |
| H-NS | 6-20 | 9.279 |
| IHF | 363-375 | 9.143 |
| Nac | 371-385 | 8.959 |
| MalT | 166-175 | 8.662 |
| ArcA | 330-390 | 8.602 |
| NagC | 330-352 | 8.210 |
| LacI | 372-392 | 8.184 |
| TorR | 326-335 | 8.166 |
| MetJ | 224-231 | 8.082 |
| RhaS | 349-365 | 7.803 |
| MarA | 372-392 | 7.793 |
| CytR | 239-278 | 7.714 |
| GalS | 3-18 | 7.476 |
| GalR | 3-18 | 7.476 |
| NtrC | 61-77 | 7.283 |
| GadE | 375-394 | 7.281 |
| ArgR | 375-390 | 7.076 |
| NarL | 338-344 | 7.041 |
| Mlc | 372-394 | 6.964 |
| GlpR | 371-390 | 6.957 |
| CpxR | 111-125 | 6.741 |
| TyrR | 218-239 | 6.662 |
| ArgP | 362-374 | 6.517 |
| DnaA | 226-234 | 6.355 |
| MelR | 288-305 | 6.314 |
| DeoR | 69-84 | 6.272 |
| Ada | 154-181 | 6.237 |
| PhoB | 9-28 | 6.039 |
| RcsB | 215-228 | 5.670 |
| ModE | 105-131 | 5.552 |
| XylR | 89-106 | 5.489 |
| Lrp | 63-74 | 5.312 |
| NarP | 277-283 | 5.094 |