| TF name | Position | PWM scan score |
| UlaR | 59-78 | 12.169 |
| CysB | 89-130 | 10.067 |
| Ada | 205-232 | 10.034 |
| IHF | 179-191 | 9.746 |
| Fis | 360-380 | 9.492 |
| MalT | 293-302 | 9.278 |
| CRP | 224-245 | 8.967 |
| FNR | 222-243 | 8.557 |
| AraC | 360-377 | 8.414 |
| SoxS | 143-160 | 8.259 |
| CueR | 140-158 | 8.043 |
| ArgR | 19-34 | 7.926 |
| RcsB | 205-218 | 7.870 |
| NarL | 121-127 | 7.336 |
| MetR | 369-392 | 7.140 |
| OmpR | 331-350 | 7.033 |
| Mlc | 254-276 | 6.641 |
| Lrp | 50-61 | 6.536 |
| PurR | 218-233 | 6.288 |
| FadR | 302-318 | 6.112 |
| IdnR | 263-278 | 6.055 |
| RhaS | 360-376 | 6.043 |
| DeoR | 236-251 | 6.018 |
| Nac | 84-98 | 5.956 |
| PspF | 42-58 | 5.793 |
| AgaR | 44-67 | 5.763 |
| GntR | 363-382 | 5.452 |
| ModE | 330-356 | 5.434 |
| NorR | 361-377 | 5.268 |
| NagC | 256-278 | 5.146 |
| NtrC | 20-36 | 5.064 |