| TF name | Position | PWM scan score |
| OmpR | 363-382 | 12.678 |
| RhaS | 153-169 | 12.505 |
| Fis | 325-345 | 8.273 |
| FadR | 13-29 | 8.163 |
| Nac | 368-382 | 7.973 |
| CRP | 333-354 | 7.902 |
| PhoB | 355-374 | 7.527 |
| GadE | 371-390 | 7.190 |
| RcsB | 311-324 | 7.149 |
| UlaR | 250-269 | 7.128 |
| Rob | 362-382 | 7.097 |
| ArcA | 330-390 | 6.929 |
| IHF | 215-227 | 6.812 |
| Ada | 252-279 | 6.672 |
| AgaR | 357-380 | 6.625 |
| UxuR | 358-375 | 6.482 |
| MetJ | 182-189 | 6.471 |
| Lrp | 333-344 | 6.309 |
| ArgP | 357-369 | 6.132 |
| NarP | 365-371 | 6.040 |
| PhoP | 143-159 | 5.981 |
| H-NS | 380-394 | 5.854 |
| TyrR | 340-361 | 5.803 |
| ModE | 353-379 | 5.617 |
| XylR | 361-378 | 5.493 |
| TorR | 14-23 | 5.414 |
| DnaA | 338-346 | 5.140 |
| NorR | 266-282 | 5.086 |