| TF name | Position | PWM scan score |
| FadR | 62-78 | 13.288 |
| Fis | 231-251 | 11.695 |
| GcvA | 337-365 | 11.589 |
| H-NS | 116-130 | 11.540 |
| ArcA | 335-395 | 11.407 |
| OmpR | 368-387 | 11.255 |
| CRP | 376-397 | 11.030 |
| ArgR | 234-249 | 9.600 |
| ModE | 127-153 | 9.411 |
| CytR | 219-258 | 9.387 |
| Nac | 375-389 | 9.365 |
| UlaR | 362-381 | 9.213 |
| RcsB | 380-393 | 9.212 |
| PspF | 307-323 | 9.142 |
| GntR | 96-115 | 9.020 |
| FNR | 360-381 | 8.964 |
| MarA | 84-104 | 8.838 |
| MetJ | 228-235 | 8.612 |
| DnaA | 284-292 | 8.503 |
| IdnR | 363-378 | 8.417 |
| IHF | 242-254 | 8.318 |
| SoxS | 105-122 | 8.209 |
| Mlc | 360-382 | 8.022 |
| MelR | 239-256 | 7.782 |
| LexA | 232-251 | 7.761 |
| CysB | 356-397 | 7.609 |
| NorR | 7-23 | 7.537 |
| TorR | 363-372 | 7.487 |
| Fur | 117-131 | 7.485 |
| OxyR | 347-391 | 7.352 |
| RhaS | 30-46 | 7.219 |
| AgaR | 353-376 | 6.592 |
| MalT | 54-63 | 6.444 |
| Lrp | 123-134 | 6.368 |
| PhoB | 117-136 | 6.236 |
| LacI | 302-322 | 6.114 |
| NarL | 247-253 | 6.065 |
| GalR | 94-109 | 5.696 |
| GalS | 94-109 | 5.696 |
| UxuR | 64-81 | 5.464 |
| NagC | 363-385 | 5.399 |
| DeoR | 234-249 | 5.151 |
| XylR | 372-389 | 5.121 |