| TF name | Position | PWM scan score |
| NagC | 372-394 | 16.796 |
| Fis | 118-138 | 10.298 |
| LexA | 368-387 | 10.086 |
| ArgR | 381-396 | 9.418 |
| GlpR | 19-38 | 9.413 |
| H-NS | 82-96 | 8.898 |
| OmpR | 371-390 | 8.458 |
| MelR | 279-296 | 8.360 |
| RcsB | 383-396 | 8.288 |
| FruR | 146-163 | 8.253 |
| Lrp | 66-77 | 8.192 |
| IHF | 229-241 | 8.147 |
| Ada | 2-29 | 7.971 |
| FNR | 171-192 | 7.890 |
| PhoB | 132-151 | 7.625 |
| IdnR | 322-337 | 7.540 |
| PhoP | 278-294 | 7.427 |
| CpxR | 354-368 | 7.413 |
| TorR | 121-130 | 7.359 |
| CysB | 342-383 | 7.260 |
| AgaR | 334-357 | 7.218 |
| AraC | 150-167 | 6.980 |
| ArcA | 332-392 | 6.785 |
| Mlc | 48-70 | 6.671 |
| PspF | 360-376 | 6.661 |
| CRP | 196-217 | 6.574 |
| SoxS | 369-386 | 6.484 |
| MarA | 267-287 | 6.300 |
| MetJ | 196-203 | 6.291 |
| NarL | 255-261 | 6.268 |
| NorR | 368-384 | 6.255 |
| GadE | 283-302 | 6.069 |
| UlaR | 19-38 | 5.912 |
| ModE | 220-246 | 5.828 |
| Nac | 84-98 | 5.676 |
| MetR | 9-32 | 5.619 |
| NarP | 260-266 | 5.606 |
| LacI | 293-313 | 5.544 |
| XylR | 249-266 | 5.536 |
| RhaS | 214-230 | 5.115 |
| MalT | 297-306 | 5.041 |