| TF name | Position | PWM scan score |
| TyrR | 332-353 | 15.691 |
| XylR | 334-351 | 14.682 |
| MarA | 100-120 | 12.816 |
| PhoB | 155-174 | 12.610 |
| OmpR | 335-354 | 11.445 |
| ArcA | 116-176 | 11.347 |
| PurR | 249-264 | 11.312 |
| IHF | 129-141 | 10.299 |
| GcvA | 331-359 | 10.166 |
| H-NS | 337-351 | 10.096 |
| Fur | 54-68 | 9.698 |
| ArgP | 52-64 | 9.292 |
| GadE | 44-63 | 9.110 |
| PhoP | 93-109 | 8.541 |
| OxyR | 142-186 | 8.077 |
| Lrp | 81-92 | 7.862 |
| CytR | 79-118 | 7.862 |
| NagC | 257-279 | 7.800 |
| Mlc | 255-277 | 7.645 |
| AraC | 332-349 | 7.492 |
| DnaA | 127-135 | 7.469 |
| FNR | 335-356 | 7.347 |
| CysB | 170-211 | 7.296 |
| MetR | 218-241 | 7.285 |
| Fis | 310-330 | 7.033 |
| MetJ | 306-313 | 6.995 |
| UxuR | 110-127 | 6.936 |
| RcsB | 54-67 | 6.774 |
| ArgR | 169-184 | 6.712 |
| LacI | 366-386 | 6.554 |
| Nac | 121-135 | 6.477 |
| Rob | 42-62 | 5.912 |
| NarL | 204-210 | 5.661 |
| GalR | 249-264 | 5.510 |
| GalS | 249-264 | 5.510 |
| ModE | 325-351 | 5.329 |
| UlaR | 356-375 | 5.203 |
| CRP | 320-341 | 5.188 |