| TF name | Position | PWM scan score |
| OmpR | 232-251 | 14.415 |
| H-NS | 232-246 | 13.274 |
| MetR | 85-108 | 11.481 |
| Mlc | 364-386 | 11.118 |
| Nac | 214-228 | 10.999 |
| CpxR | 369-383 | 10.228 |
| ArcA | 206-266 | 9.714 |
| ArgP | 244-256 | 8.819 |
| FruR | 1-18 | 8.814 |
| PhoB | 224-243 | 8.745 |
| ModE | 110-136 | 7.795 |
| Lrp | 187-198 | 7.698 |
| PhoP | 239-255 | 7.479 |
| NarP | 11-17 | 7.377 |
| MelR | 202-219 | 7.285 |
| IHF | 110-122 | 7.201 |
| AgaR | 227-250 | 7.099 |
| NarL | 360-366 | 6.880 |
| CueR | 14-32 | 6.859 |
| GlpR | 126-145 | 6.525 |
| Fis | 123-143 | 6.476 |
| DeoR | 84-99 | 6.441 |
| DnaA | 151-159 | 6.433 |
| RcsB | 356-369 | 5.900 |
| FadR | 51-67 | 5.842 |
| CRP | 204-225 | 5.738 |
| UxuR | 136-153 | 5.464 |
| NtrC | 94-110 | 5.453 |
| MetJ | 131-138 | 5.452 |
| FNR | 149-170 | 5.439 |
| TorR | 280-289 | 5.380 |
| NorR | 380-396 | 5.347 |
| MarA | 119-139 | 5.306 |
| MalT | 290-299 | 5.107 |