| TF name | Position | PWM scan score |
| GntR | 248-267 | 18.598 |
| GlpR | 145-164 | 12.836 |
| RcsB | 322-335 | 11.247 |
| MetJ | 8-15 | 10.810 |
| OmpR | 349-368 | 10.558 |
| XylR | 369-386 | 10.432 |
| FNR | 350-371 | 10.341 |
| IHF | 53-65 | 9.650 |
| MetR | 42-65 | 9.150 |
| TyrR | 137-158 | 9.092 |
| Ada | 334-361 | 8.493 |
| GadE | 40-59 | 8.448 |
| PhoP | 320-336 | 8.428 |
| NarP | 128-134 | 8.382 |
| RhaS | 209-225 | 7.937 |
| Lrp | 143-154 | 7.850 |
| Rob | 321-341 | 7.601 |
| DnaA | 63-71 | 7.502 |
| AgaR | 51-74 | 7.461 |
| CRP | 145-166 | 7.441 |
| Fis | 209-229 | 7.398 |
| TrpR | 167-184 | 7.021 |
| NtrC | 341-357 | 6.786 |
| UxuR | 46-63 | 6.518 |
| ModE | 316-342 | 6.502 |
| ArgP | 309-321 | 6.502 |
| H-NS | 162-176 | 6.201 |
| UlaR | 223-242 | 6.068 |
| MelR | 154-171 | 6.052 |
| MarA | 188-208 | 6.043 |
| SoxS | 316-333 | 5.975 |
| CysB | 298-339 | 5.842 |
| LacI | 164-184 | 5.797 |
| CpxR | 349-363 | 5.745 |
| DeoR | 150-165 | 5.545 |
| ArcA | 280-340 | 5.250 |
| NarL | 87-93 | 5.243 |
| TorR | 309-318 | 5.104 |
| LexA | 281-300 | 5.016 |