| TF name | Position | PWM scan score |
| GcvA | 370-398 | 14.783 |
| MarA | 4-24 | 11.470 |
| MetJ | 244-251 | 9.497 |
| H-NS | 374-388 | 9.363 |
| CRP | 3-24 | 9.103 |
| OmpR | 373-392 | 9.074 |
| NarP | 225-231 | 8.025 |
| DeoR | 305-320 | 7.999 |
| ArgP | 341-353 | 7.976 |
| DnaA | 348-356 | 7.886 |
| FNR | 20-41 | 7.532 |
| XylR | 370-387 | 7.465 |
| NorR | 310-326 | 7.355 |
| NtrC | 368-384 | 7.273 |
| PhoB | 275-294 | 6.873 |
| SoxS | 334-351 | 6.838 |
| TyrR | 338-359 | 6.614 |
| Ada | 358-385 | 6.540 |
| GlpR | 74-93 | 6.455 |
| FadR | 201-217 | 6.341 |
| IHF | 41-53 | 6.130 |
| GadE | 348-367 | 6.019 |
| IdnR | 188-203 | 6.010 |
| Fur | 337-351 | 5.758 |
| ArgR | 334-349 | 5.745 |
| Fis | 347-367 | 5.714 |
| MalT | 186-195 | 5.612 |
| LexA | 244-263 | 5.481 |
| Rob | 295-315 | 5.303 |
| Lrp | 335-346 | 5.203 |
| PurR | 370-385 | 5.117 |