| TF name | Position | PWM scan score |
| MarA | 242-262 | 11.470 |
| SoxS | 234-251 | 9.343 |
| CRP | 241-262 | 9.103 |
| AraC | 211-228 | 8.974 |
| FadR | 213-229 | 8.164 |
| FNR | 258-279 | 7.532 |
| MetJ | 390-397 | 7.013 |
| ArgP | 164-176 | 6.953 |
| DnaA | 181-189 | 6.709 |
| H-NS | 257-271 | 6.690 |
| PhoB | 207-226 | 6.604 |
| GlpR | 312-331 | 6.455 |
| TorR | 182-191 | 6.394 |
| IHF | 279-291 | 6.130 |
| Rob | 46-66 | 6.016 |
| RcsB | 235-248 | 5.631 |
| TyrR | 108-129 | 5.625 |
| OmpR | 240-259 | 5.489 |
| Fis | 231-251 | 5.323 |
| LacI | 1-21 | 5.090 |