| TF name | Position | PWM scan score |
| MetR | 238-261 | 12.264 |
| NtrC | 348-364 | 11.300 |
| CueR | 54-72 | 9.269 |
| MarA | 353-373 | 9.223 |
| PhoP | 157-173 | 8.552 |
| H-NS | 352-366 | 8.289 |
| Rob | 365-385 | 8.115 |
| NarL | 250-256 | 7.740 |
| IdnR | 384-399 | 6.941 |
| Lrp | 221-232 | 6.847 |
| PhoB | 379-398 | 6.745 |
| Fis | 283-303 | 6.695 |
| RhaS | 167-183 | 6.541 |
| NarP | 255-261 | 6.524 |
| IHF | 158-170 | 6.466 |
| CRP | 155-176 | 6.337 |
| TyrR | 157-178 | 6.305 |
| XylR | 351-368 | 6.158 |
| SoxS | 378-395 | 6.017 |
| FNR | 339-360 | 5.970 |
| TorR | 166-175 | 5.838 |
| ArgR | 361-376 | 5.764 |
| AraC | 274-291 | 5.750 |
| Fur | 156-170 | 5.738 |
| MelR | 278-295 | 5.664 |
| DeoR | 286-301 | 5.613 |
| RcsB | 118-131 | 5.062 |