| TF name | Position | PWM scan score |
| GntR | 305-324 | 15.011 |
| NagC | 106-128 | 12.824 |
| FNR | 255-276 | 12.757 |
| Nac | 300-314 | 11.159 |
| Fis | 163-183 | 10.659 |
| H-NS | 26-40 | 10.479 |
| MetR | 362-385 | 10.274 |
| MetJ | 141-148 | 10.216 |
| MelR | 271-288 | 10.157 |
| NtrC | 277-293 | 9.857 |
| TorR | 301-310 | 9.471 |
| GlpR | 323-342 | 9.177 |
| ArcA | 319-379 | 8.478 |
| FruR | 54-71 | 8.089 |
| MarA | 148-168 | 7.786 |
| Ada | 35-62 | 7.206 |
| MalT | 224-233 | 7.186 |
| Lrp | 356-367 | 7.045 |
| NarL | 315-321 | 7.041 |
| IHF | 351-363 | 6.935 |
| OmpR | 375-394 | 6.875 |
| SoxS | 308-325 | 6.786 |
| GcvA | 146-174 | 6.761 |
| GalS | 158-173 | 6.566 |
| GalR | 158-173 | 6.566 |
| CpxR | 150-164 | 6.557 |
| UlaR | 380-399 | 6.387 |
| PhoP | 202-218 | 6.128 |
| UxuR | 121-138 | 6.072 |
| ArgP | 82-94 | 6.056 |
| NorR | 146-162 | 5.880 |
| AraC | 314-331 | 5.572 |
| NarP | 69-75 | 5.557 |
| AgaR | 376-399 | 5.517 |
| RhaS | 198-214 | 5.414 |
| Rob | 207-227 | 5.335 |
| DeoR | 333-348 | 5.220 |
| ModE | 28-54 | 5.145 |
| RcsB | 145-158 | 5.010 |