| TF name | Position | PWM scan score |
| LacI | 3-23 | 12.273 |
| DeoR | 194-209 | 10.749 |
| NarP | 235-241 | 9.705 |
| MetJ | 22-29 | 8.714 |
| XylR | 275-292 | 8.204 |
| PhoB | 288-307 | 8.155 |
| RcsB | 149-162 | 7.611 |
| ModE | 235-261 | 7.192 |
| AgaR | 45-68 | 6.690 |
| TorR | 243-252 | 6.665 |
| MarA | 94-114 | 5.879 |
| GlpR | 15-34 | 5.815 |
| RhaS | 205-221 | 5.796 |
| H-NS | 383-397 | 5.750 |
| AraC | 41-58 | 5.532 |
| NarL | 67-73 | 5.373 |
| SoxS | 251-268 | 5.344 |
| GalS | 201-216 | 5.065 |
| GalR | 201-216 | 5.065 |