| TF name | Position | PWM scan score |
| UlaR | 347-366 | 9.659 |
| AraC | 199-216 | 8.061 |
| XylR | 265-282 | 7.925 |
| MetR | 284-307 | 7.569 |
| GalR | 126-141 | 7.416 |
| GalS | 126-141 | 7.416 |
| AgaR | 339-362 | 7.306 |
| PhoB | 336-355 | 6.904 |
| SoxS | 377-394 | 6.862 |
| NarL | 389-395 | 6.718 |
| NarP | 227-233 | 6.275 |
| Nac | 348-362 | 6.178 |
| ArgP | 284-296 | 5.891 |
| NtrC | 103-119 | 5.749 |
| Rob | 115-135 | 5.723 |
| GlpR | 147-166 | 5.672 |
| Fur | 112-126 | 5.656 |
| CysB | 357-398 | 5.623 |
| OmpR | 82-101 | 5.572 |
| Lrp | 345-356 | 5.545 |
| H-NS | 265-279 | 5.454 |
| IdnR | 286-301 | 5.348 |
| MelR | 76-93 | 5.334 |
| CueR | 121-139 | 5.192 |
| MetJ | 163-170 | 5.185 |
| Fis | 86-106 | 5.177 |
| IHF | 383-395 | 5.021 |
| FhlA | 250-289 | 5.005 |