| TF name | Position | PWM scan score |
| DnaA | 244-252 | 12.188 |
| AgaR | 40-63 | 9.859 |
| CRP | 370-391 | 9.789 |
| IHF | 84-96 | 9.000 |
| Nac | 264-278 | 8.941 |
| PhoB | 281-300 | 8.528 |
| SoxS | 373-390 | 8.313 |
| Fis | 60-80 | 8.261 |
| FruR | 231-248 | 8.214 |
| RhaS | 156-172 | 8.158 |
| CytR | 69-108 | 7.949 |
| MalT | 201-210 | 7.779 |
| NagC | 53-75 | 7.731 |
| RcsB | 37-50 | 7.654 |
| Rob | 275-295 | 7.583 |
| GalS | 24-39 | 6.833 |
| GalR | 24-39 | 6.833 |
| DeoR | 266-281 | 6.553 |
| Lrp | 65-76 | 6.018 |
| H-NS | 304-318 | 5.795 |
| OmpR | 277-296 | 5.791 |
| NarL | 6-12 | 5.740 |
| NorR | 56-72 | 5.722 |
| XylR | 235-252 | 5.625 |
| GlpR | 346-365 | 5.624 |
| CueR | 127-145 | 5.594 |
| MarA | 141-161 | 5.583 |
| GntR | 105-124 | 5.552 |
| ModE | 371-397 | 5.094 |