| TF name | Position | PWM scan score |
| UlaR | 365-384 | 16.215 |
| NorR | 373-389 | 13.693 |
| RcsB | 150-163 | 12.883 |
| SoxS | 293-310 | 11.333 |
| PhoB | 347-366 | 10.815 |
| Rob | 297-317 | 10.623 |
| NagC | 315-337 | 9.745 |
| GadE | 315-334 | 9.628 |
| Ada | 368-395 | 9.377 |
| ArcA | 335-395 | 9.175 |
| FadR | 173-189 | 9.015 |
| XylR | 369-386 | 9.008 |
| Nac | 115-129 | 8.659 |
| MarA | 353-373 | 8.337 |
| TrpR | 310-327 | 8.176 |
| IHF | 306-318 | 8.100 |
| ArgP | 323-335 | 7.889 |
| H-NS | 323-337 | 7.868 |
| TorR | 258-267 | 7.571 |
| RhaS | 133-149 | 7.319 |
| CRP | 348-369 | 7.172 |
| MetJ | 84-91 | 7.056 |
| Lrp | 377-388 | 6.654 |
| Fis | 317-337 | 6.607 |
| NarL | 69-75 | 6.331 |
| AgaR | 361-384 | 6.245 |
| FNR | 164-185 | 6.225 |
| CueR | 289-307 | 6.193 |
| PspF | 67-83 | 6.110 |
| FruR | 216-233 | 6.066 |
| MetR | 360-383 | 5.866 |
| AraC | 84-101 | 5.724 |
| ModE | 300-326 | 5.563 |
| MalT | 96-105 | 5.267 |
| NarP | 312-318 | 5.224 |
| GalS | 282-297 | 5.222 |
| GalR | 282-297 | 5.222 |