| TF name | Position | PWM scan score |
| NorR | 200-216 | 11.740 |
| GadE | 360-379 | 11.316 |
| SoxS | 119-136 | 9.023 |
| NarL | 378-384 | 8.619 |
| FNR | 373-394 | 8.546 |
| ArgP | 124-136 | 8.440 |
| FadR | 278-294 | 8.275 |
| AgaR | 140-163 | 8.185 |
| FruR | 198-215 | 8.093 |
| MetR | 115-138 | 7.851 |
| Fis | 124-144 | 7.628 |
| Fur | 39-53 | 7.551 |
| AraC | 125-142 | 7.375 |
| IHF | 138-150 | 7.292 |
| ArgR | 127-142 | 7.251 |
| CRP | 348-369 | 7.244 |
| DeoR | 335-350 | 7.227 |
| GlpR | 372-391 | 6.936 |
| XylR | 369-386 | 6.807 |
| Lrp | 127-138 | 6.579 |
| ModE | 360-386 | 6.530 |
| H-NS | 124-138 | 6.302 |
| MalT | 351-360 | 6.222 |
| UxuR | 135-152 | 6.084 |
| OmpR | 45-64 | 6.029 |
| Nac | 50-64 | 6.022 |
| TyrR | 354-375 | 5.774 |
| DnaA | 9-17 | 5.767 |
| NarP | 373-379 | 5.765 |
| NtrC | 342-358 | 5.726 |
| MarA | 349-369 | 5.477 |
| PhoB | 132-151 | 5.307 |
| TorR | 145-154 | 5.202 |