| TF name | Position | PWM scan score |
| Ada | 217-244 | 14.424 |
| AgaR | 285-308 | 11.030 |
| NagC | 134-156 | 11.022 |
| GntR | 328-347 | 9.989 |
| H-NS | 168-182 | 9.929 |
| MarA | 346-366 | 9.924 |
| IHF | 322-334 | 9.835 |
| Rob | 73-93 | 9.728 |
| MelR | 321-338 | 9.650 |
| CpxR | 123-137 | 9.537 |
| CRP | 128-149 | 9.428 |
| LacI | 346-366 | 9.247 |
| UxuR | 345-362 | 8.846 |
| PurR | 278-293 | 8.610 |
| UlaR | 229-248 | 8.424 |
| XylR | 130-147 | 8.330 |
| NorR | 130-146 | 8.096 |
| AraC | 226-243 | 8.012 |
| NtrC | 339-355 | 7.838 |
| RcsB | 193-206 | 7.631 |
| ArgP | 36-48 | 7.573 |
| CytR | 296-335 | 7.243 |
| Fis | 322-342 | 6.974 |
| MetJ | 368-375 | 6.829 |
| TorR | 168-177 | 6.437 |
| FNR | 116-137 | 6.395 |
| NarL | 119-125 | 6.294 |
| LexA | 117-136 | 6.142 |
| ArcA | 260-320 | 6.074 |
| Lrp | 257-268 | 6.006 |
| GlpR | 347-366 | 5.993 |
| DeoR | 81-96 | 5.980 |
| MalT | 379-388 | 5.849 |
| FadR | 361-377 | 5.710 |
| GalR | 347-362 | 5.446 |
| GalS | 347-362 | 5.446 |
| Mlc | 241-263 | 5.351 |
| OmpR | 75-94 | 5.176 |