| TF name | Position | PWM scan score |
| Nac | 357-371 | 17.030 |
| ArcA | 334-394 | 13.111 |
| IHF | 295-307 | 12.918 |
| CysB | 354-395 | 12.663 |
| DeoR | 222-237 | 12.118 |
| GcvA | 82-110 | 10.893 |
| H-NS | 374-388 | 10.619 |
| Fis | 368-388 | 10.584 |
| ArgP | 386-398 | 9.439 |
| Rob | 372-392 | 9.044 |
| XylR | 231-248 | 8.846 |
| RhaS | 36-52 | 8.682 |
| Lrp | 173-184 | 8.487 |
| MarA | 284-304 | 8.480 |
| NarP | 60-66 | 8.154 |
| Mlc | 359-381 | 8.098 |
| MetJ | 87-94 | 7.765 |
| CpxR | 353-367 | 7.693 |
| AraC | 81-98 | 7.609 |
| TorR | 330-339 | 7.359 |
| GadE | 378-397 | 7.268 |
| GlpR | 265-284 | 7.016 |
| SoxS | 286-303 | 6.725 |
| TyrR | 83-104 | 6.630 |
| OmpR | 377-396 | 6.570 |
| NorR | 314-330 | 6.562 |
| NarL | 377-383 | 6.515 |
| PhoP | 362-378 | 6.442 |
| NagC | 365-387 | 6.333 |
| FadR | 42-58 | 6.289 |
| LacI | 267-287 | 6.253 |
| UxuR | 347-364 | 6.175 |
| CueR | 140-158 | 5.953 |
| GntR | 29-48 | 5.758 |
| CRP | 218-239 | 5.683 |
| Fur | 379-393 | 5.613 |
| ArgR | 371-386 | 5.458 |
| GalS | 252-267 | 5.414 |
| GalR | 252-267 | 5.414 |
| FNR | 162-183 | 5.339 |
| DnaA | 349-357 | 5.139 |
| RcsB | 353-366 | 5.019 |