| TF name | Position | PWM scan score |
| SoxS | 227-244 | 11.511 |
| Fur | 328-342 | 10.685 |
| DnaA | 336-344 | 9.831 |
| H-NS | 205-219 | 9.769 |
| MarA | 166-186 | 9.598 |
| Lrp | 331-342 | 9.240 |
| FNR | 225-246 | 9.114 |
| ArgP | 204-216 | 8.819 |
| IHF | 338-350 | 8.768 |
| PhoB | 318-337 | 8.510 |
| AraC | 218-235 | 8.353 |
| ArcA | 64-124 | 7.818 |
| GntR | 124-143 | 7.752 |
| PhoP | 226-242 | 7.679 |
| ModE | 194-220 | 7.443 |
| CRP | 188-209 | 7.376 |
| NarP | 41-47 | 7.352 |
| MetR | 362-385 | 7.288 |
| NagC | 315-337 | 7.250 |
| Nac | 320-334 | 7.148 |
| Fis | 233-253 | 7.090 |
| Rob | 284-304 | 6.959 |
| Mlc | 208-230 | 6.959 |
| RhaS | 302-318 | 6.864 |
| RcsB | 325-338 | 6.810 |
| TyrR | 331-352 | 6.647 |
| PspF | 202-218 | 6.633 |
| OmpR | 222-241 | 6.616 |
| GlpR | 172-191 | 6.503 |
| TorR | 337-346 | 6.473 |
| UlaR | 334-353 | 6.465 |
| ArgR | 255-270 | 6.418 |
| MelR | 325-342 | 6.204 |
| AgaR | 331-354 | 6.084 |
| CysB | 338-379 | 5.991 |
| Ada | 315-342 | 5.767 |
| NarL | 123-129 | 5.661 |
| CpxR | 314-328 | 5.487 |
| XylR | 214-231 | 5.290 |
| MalT | 381-390 | 5.166 |
| IdnR | 83-98 | 5.112 |
| DcuR | 75-129 | 5.009 |