| TF name | Position | PWM scan score |
| Nac | 340-354 | 14.190 |
| PhoB | 233-252 | 12.855 |
| SoxS | 122-139 | 12.552 |
| TorR | 379-388 | 11.455 |
| CytR | 206-245 | 10.541 |
| AraC | 336-353 | 10.336 |
| PhoP | 114-130 | 10.287 |
| Lrp | 157-168 | 9.550 |
| XylR | 190-207 | 9.303 |
| UlaR | 291-310 | 9.144 |
| FadR | 78-94 | 8.460 |
| ArgR | 123-138 | 7.866 |
| UxuR | 243-260 | 7.689 |
| IdnR | 285-300 | 7.268 |
| FNR | 279-300 | 7.258 |
| MarA | 120-140 | 7.234 |
| MalT | 18-27 | 7.195 |
| CRP | 276-297 | 7.062 |
| DnaA | 175-183 | 6.741 |
| MetJ | 332-339 | 6.732 |
| PspF | 188-204 | 6.649 |
| IHF | 291-303 | 6.549 |
| NarP | 368-374 | 6.524 |
| H-NS | 226-240 | 6.509 |
| DeoR | 230-245 | 6.153 |
| FhlA | 257-296 | 6.142 |
| Fis | 192-212 | 5.912 |
| NtrC | 60-76 | 5.906 |
| GntR | 186-205 | 5.711 |
| GcvA | 281-309 | 5.659 |
| ArcA | 179-239 | 5.488 |
| NarL | 280-286 | 5.243 |
| AgaR | 181-204 | 5.152 |
| GlpR | 226-245 | 5.050 |