| TF name | Position | PWM scan score |
| CytR | 258-297 | 11.304 |
| CRP | 282-303 | 10.253 |
| PhoP | 289-305 | 9.503 |
| H-NS | 43-57 | 9.132 |
| OmpR | 286-305 | 8.960 |
| TrpR | 254-271 | 8.934 |
| PhoB | 366-385 | 8.673 |
| TyrR | 218-239 | 8.646 |
| RcsB | 256-269 | 8.391 |
| UlaR | 256-275 | 8.367 |
| ArcA | 222-282 | 8.353 |
| GlpR | 303-322 | 8.294 |
| NarL | 251-257 | 8.169 |
| Lrp | 209-220 | 8.135 |
| CysB | 225-266 | 8.113 |
| MetR | 196-219 | 7.820 |
| Fis | 228-248 | 7.803 |
| GcvA | 162-190 | 7.400 |
| ArgR | 275-290 | 7.378 |
| MetJ | 362-369 | 7.240 |
| MalT | 201-210 | 7.118 |
| Fur | 215-229 | 7.083 |
| ArgP | 274-286 | 7.044 |
| RhaS | 225-241 | 6.970 |
| AraC | 35-52 | 6.939 |
| NagC | 331-353 | 6.801 |
| FNR | 154-175 | 6.744 |
| IHF | 123-135 | 6.560 |
| ModE | 131-157 | 6.461 |
| GntR | 222-241 | 6.390 |
| DeoR | 49-64 | 6.288 |
| Ada | 111-138 | 6.162 |
| Nac | 256-270 | 6.105 |
| FruR | 26-43 | 5.834 |
| SoxS | 297-314 | 5.737 |
| DnaA | 226-234 | 5.572 |
| AgaR | 32-55 | 5.556 |
| CpxR | 123-137 | 5.226 |
| IdnR | 231-246 | 5.112 |
| LacI | 312-332 | 5.102 |
| XylR | 1-18 | 5.099 |