| TF name | Position | PWM scan score |
| NarP | 273-279 | 8.982 |
| CpxR | 238-252 | 8.562 |
| SoxS | 318-335 | 8.339 |
| Lrp | 119-130 | 7.982 |
| PhoB | 18-37 | 7.747 |
| TorR | 56-65 | 7.186 |
| DeoR | 166-181 | 6.804 |
| H-NS | 73-87 | 6.723 |
| PhoP | 71-87 | 6.506 |
| MelR | 137-154 | 6.440 |
| CRP | 75-96 | 5.877 |
| GadE | 10-29 | 5.855 |
| MetR | 166-189 | 5.833 |
| Fis | 114-134 | 5.817 |
| MalT | 140-149 | 5.749 |
| GalS | 229-244 | 5.607 |
| GalR | 229-244 | 5.607 |
| NarL | 54-60 | 5.595 |
| UxuR | 62-79 | 5.555 |
| Rob | 324-344 | 5.520 |
| NtrC | 348-364 | 5.450 |
| FadR | 200-216 | 5.427 |
| FNR | 60-81 | 5.373 |
| Nac | 259-273 | 5.146 |