| TF name | Position | PWM scan score |
| TorR | 313-322 | 10.701 |
| UlaR | 335-354 | 10.652 |
| Ada | 12-39 | 10.621 |
| GcvA | 101-129 | 10.508 |
| GlpR | 191-210 | 9.310 |
| GntR | 368-387 | 9.106 |
| Nac | 169-183 | 8.879 |
| DnaA | 193-201 | 8.717 |
| CpxR | 365-379 | 8.351 |
| LexA | 268-287 | 8.334 |
| IdnR | 370-385 | 8.326 |
| IHF | 294-306 | 8.043 |
| Fis | 267-287 | 7.886 |
| TyrR | 238-259 | 7.749 |
| MetJ | 274-281 | 7.732 |
| PhoB | 358-377 | 7.522 |
| FNR | 171-192 | 7.471 |
| ArgP | 172-184 | 7.423 |
| Lrp | 313-324 | 7.257 |
| NorR | 68-84 | 7.185 |
| NarL | 259-265 | 7.041 |
| GalR | 262-277 | 7.009 |
| GalS | 262-277 | 7.009 |
| PhoP | 382-398 | 6.924 |
| CRP | 338-359 | 6.818 |
| NarP | 267-273 | 6.629 |
| RcsB | 314-327 | 5.967 |
| SoxS | 378-395 | 5.928 |
| AraC | 332-349 | 5.926 |
| AgaR | 274-297 | 5.805 |
| ArcA | 320-380 | 5.653 |
| OmpR | 337-356 | 5.649 |
| RhaS | 192-208 | 5.570 |
| H-NS | 73-87 | 5.541 |